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Materiale didattico

Anno Accademico 2016/17

MICROBIOLOGIA (Viticoltura e Enologia)

Il materiale e le informaizoni del corso sono disponibili in ARIEL

N.B. la seconda prova in itinere (8 gennaio ore 13:30) sarà in aula C21

 

Anno Accademico 2016/17

MICRORGANISMI PROBIOTICI: BIOTECNOLOGIE E APPLICAZIONI

Gli studenti non frequentanti iscritti al corso mi mandino una email per ricevere le credenziali di accesso al materiale.

Lezione 1 (08.03.2017)
Lezione 2 (15.03.2017)
Lezione 3 (22.03.2017)
Lezione 4 (29.03.2017)
Lezione 6 (12.04.2017)
Lezione 7 (19.04.2017)
Lezione 8 (26.04.2017)
Lezione 9 (10.05.2017)
Lezione 10 (11.05.2017) – oggetto d’esame solo per K05
Lezione 11 (17.05.2017)
Lezione 12 (24.05.2017)
Lezione 13 (25.05.2017) – oggetto d’esame solo per K05

MICROBIOLOGIA (Viticoltura e Enologia)

News (19/01) Esiti della prova in itinere (voti dei due parziali + voto finale).

Materiale mostrato a lezione:

Lezione 1 (giovedì 29 settembre 2016)

Lezione 2 (venerdì 30 settembre 2016)

Lezione 3 (giovedì 6 ottobre 2016)

Lezione 4 (venerdì 7 ottobre 2016)

Lezione 5 (giovedì 13 ottobre 2016)

Lezione 6 (venerdì 14 ottobre 2016)

Lezione 7 (giovedì 20 ottobre 2016)

Lezione 8 (venerdì 21 ottobre 2016)

Lezione 9 (giovedì 27 ottobre 2016)

Lezione 10 (venerdì 28 ottobre 2016)

Lezioni 11-12 (giovedì 3 e venerdì 4 novembre 2016)

Lezioni 13-14 (giovedì 10 e venerdì 11 novembre 2016)

Lezioni 15-16-17 (mercoledì 16, giovedì 17 e venerdì 18 novembre 2016)

Lezioni 18-19 (giovedì 1 e venerdì 2 dicembre 2016)

Publications

List of publications

Articles in international peer-reviewed journals (*, Corresponding Author)

64. Balzaretti S, Taverniti V, *GUGLIELMETTI S, Fiore W, Minuzzo M, Ngo HN, Ngere JB, Sadiq S, Humphreys PN, Laws AP. A novel rhamnose-rich hetero-exopolysaccharide isolated from Lactobacillus paracasei DG activates THP-1 human monocytic cells. Applied and Environmental Microbiology. 2016. In press

63. Taibi A, Singh N, Chen J, Arioli S, GUGLIELMETTI S, Comelli EM. Time and strain-specific downregulation of intestinal EPAS1 via miR-148a by Bifidobacterium bifidum. Molecular Nutrition & Food Research. 2016 Nov 24. doi:10.1002/mnfr.201600596. [Epub ahead of print]

62. Gargari G, Taverniti V, Balzaretti S, Ferrario C, Gardana C, Simonetti P, *GUGLIELMETTI S.  Consumption of a Bifidobacterium bifidum Strain for 4 weeks modulates the dominant intestinal bacterial taxa and fecal butyrate in healthy adults. Applied and Environmental Microbiology. 2016 Sep 16;82(19):5850-9.

61. Montagna M, Mereghetti V, Gargari G, GUGLIELMETTI S, Faoro F, Lozzia G, Locatelli D, Limonta D. Evidence of a bacterial core in the stored products pest Plodia interpunctella: the influence of different diets. Environmental Microbiology. 2016. Jul 11. doi: 10.1111/1462-2920.13450. [Epub ahead of print]

60. Rigoni R, Fontana E, GUGLIELMETTI S, Fosso B, D’Erchia AM, Maina V, Taverniti V, Castiello MC, Mantero S, Pacchiana G, Musio S, Pedotti R, Selmi C, Mora JR, Pesole G, Vezzoni P, Poliani PL, Grassi F, Villa A, Cassani B. Intestinal microbiota sustains inflammation and autoimmunity induced by hypomorphic RAG defects. Journal of Experimental Medicine. 2016 Mar 7;213(3):355-75.

59. Colombo S, Arioli S, GUGLIELMETTI S, Lunelli F, Mora D. Virome-associated antibiotic-resistance genes in an experimental aquaculture facility. FEMS Microbiology Ecology. 2016 Mar;92(3).

58. Arioli S, Della Scala G, Remagni MC, Stuknyte M, Colombo S, Guglielmetti S, De Noni I, Ragg E, Mora D. Streptococcus thermophilus urease activity boosts Lactobacillus delbrueckii subsp. bulgaricus homolactic fermentation. International Journal of Food Microbiology. 2016 Jan pii: S0168-1605(16)30007-1. doi: 10.1016/j.ijfoodmicro.2016.01.006.

57. Balzaretti S, Taverniti V, Rondini G, Marcolegio G, Minuzzo M, Remagni MC, Fiore W, Arioli S, *GUGLIELMETTI S. The vaginal isolate Lactobacillus paracasei LPC-S01 (DSM 26760) is suitable for oral administration. Frontiers in Microbiology. 2015 Sep 15;6:952.

56. Koirala R, Taverniti V, Balzaretti S, Ricci G, Fortina MG, *GUGLIELMETTI S. Melting curve analysis of a i PCR fragment for the rapid genotyping of strains belonging to the Lactobacillus casei group of species. Microbiological Research. 2015 Apr;173:50-8.

55. Ferrario C, Taverniti V, Milani C, Fiore W, Laureati M, De Noni I, Stuknyte M, Chouaia B, Riso P, *GUGLIELMETTI S. Modulation of fecal Clostridiales bacteria and butyrate by probiotic intervention with Lactobacillus paracasei DG varies among healthy adults. Journal of Nutrition. 2014 Nov;144(11):1787-96.

54. Turroni F, Duranti S, Bottacini F, GUGLIELMETTI S, Van Sinderen D, Ventura M. Bifidobacterium bifidum as an example of a specialized human gut commensal. Frontiers in Microbiology. 2014 Aug 21;5:4doi: 10.3389/fmicb.2014.004eCollection 2014.

53. Taverniti V, *GUGLIELMETTI S. Methodological issues in the study of intestinal microbiota in irritable bowel syndrome. World Journal of Gastroenterology. 2014 Jul 21;20(27):8821-

52. Taverniti V, Fracassetti D, Del Bo’ C, Lanti C, Minuzzo M, Klimis-Zacas D, Riso P, GUGLIELMETTI S. Immunomodulatory effect of a wild blueberry anthocyanin-rich extract in human Caco-2 intestinal cells. Journal of Agricultural and Food Chemistry. 2014 Aug 20;62(33):8346-51.

51. *GUGLIELMETTI S, Zanoni I, Balzaretti S, Miriani M, Taverniti V, De Noni I, Presti I, Stuknyte M, Scarafoni A, Arioli S, Iametti S, Bonomi F, Mora D, Karp M, Granucci F. Murein lytic enzyme TgaA of Bifidobacterium bifidum MIMBb75 modulates dendritic cell maturation through its cysteine- and histidine-dependent amidohydrolase/peptidase (CHAP) amidase domain. Applied and Environmental Microbiology. 2014 Sep;80(17):5170-7.

50. *GUGLIELMETTI S, Balzaretti S, Taverniti V, Miriani M, Milani C, Scarafoni A, Corona S, Ciranna A, Arioli S, Santala V, Iametti S, Bonomi F, Ventura M, Mora D, Karp M. TgaA, a VirB1-like component belonging to a putative type IV secretion system of Bifidobacterium bifidum MIMBb75. Applied and Environmental Microbiology. 2014 Sep;80(17):5161-9.

49. Arioli S, GUGLIELMETTI S, Amalfitano S, Viti C, Marchi E, Decorosi F, Giovannetti L, Mora D. Characterization of tetA-like gene encoding for a major facilitator superfamily efflux pump in Streptococcus thermophilus. FEMS Microbiology Letters. 2014 Jun;355(1):61-70.

48. Petrarca C, Clemente E, Toto V, Iezzi M, Rossi C, Zanotta S, Mistrello G, Zanoni I, Granucci F, Arioli S, Mora D, GUGLIELMETTI S, Paganelli R, Di Gioacchino M. rBet v 1 immunotherapy of sensitized mice with Streptococcus thermophilus as vehicle and adjuvant. Human vaccines & immunotherapeutics. 2014 Mar 6;10(5).

47. Taverniti V, Scabiosi C, Arioli S, Mora D, * GUGLIELMETTI S. Short-term daily intake of 6 billion live probiotic cells can be insufficient in healthy adults to modulate the intestinal bifidobacteria and lactobacilli. Journal of Functional Foods. 2014;6:482-91.

46. Stuknyte M, Brockmann EC, Huovinen T, GUGLIELMETTI S, Mora D, Taverniti V, Arioli S, De Noni I, Lamminmäki U. Lactobacillus helveticus MIMLh5-specific antibodies for detection of S-layer protein in Grana Padano PDO cheese. Applied and Environmental Microbiology. 2014 Jan;80(2):694-703.

45. Turroni F, Taverniti V, Ruas-Madiedo P, Duranti S, GUGLIELMETTI S, Lugli GA, Gioiosa L, Palanza P, Margolles A, van Sinderen D, Ventura M. Bifidobacterium bifidum PRL2010 modulates the host innate immune response. Applied and Environmental Microbiology. 2014 Jan;80(2):730-40.

44. Koirala, R., Giovanni, R., Tavernitti, V., Ferrario, C., Malla, R., Shrestha, S. and Fortina, M. G. GUGLIELMETTI S*. Isolation and molecular characterization of lactobacilli from traditional fermented Dahi produced at different altitudes in Nepal. Dairy Science & Technology. 2014; 94:397–408.

43. *GUGLIELMETTI S, Basilico R, Taverniti V, Arioli S, Piagnani C, Bernacchi A. Luteibacter rhizovicinus MIMR1 promotes root development in barley (Hordeum vulgare L.) under laboratory conditions. World Journal of Microbiology and Biotechnology. 2013 Nov;29(11):2025-32.

42. Kainulainen V, Reunanen J, Hiippala K, GUGLIELMETTI S, Vesterlund S, Palva A, Satokari R. BopA Does Not Have a Major Role in the Adhesion of Bifidobacterium bifidum to Intestinal Epithelial Cells, Extracellular Matrix Proteins, and Mucus. Applied and Environmental Microbiology. 2013 Nov;79(22):6989-97.

41. *GUGLIELMETTI S, Fracassetti D, Taverniti V, Del Bo’ C, Vendrame S, Klimis-Zacas D, Arioli S, Riso P, Porrini M. Differential modulation of human intestinal Bifidobacterium populations after consumption of a wild blueberry (Vaccinium angustifolium) drink. Journal of Agricultural and Food Chemistry. 2013 Aug 28;61(34):8134-40.

40. Singh N, Arioli S, Wang A, Villa CR, Jahani R, Song YS, Mora D, GUGLIELMETTI S, Comelli EM. Impact of Bifidobacterium bifidum MIMBb75 on mouse intestinal microorganisms. FEMS Microbiology Ecology. 2013 Aug;85(2):369-75.

39. Turroni F, Serafini F, Foroni E, Duranti S, O’Connell Motherway M, Taverniti V, Mangifesta M, Milani C, Viappiani A, Roversi T, Sánchez B, Santoni A, Gioiosa L, Ferrarini A, Delledonne M, Margolles A, Piazza L, Palanza P, Bolchi A, GUGLIELMETTI S, van Sinderen D, Ventura M. Role of sortase-dependent pili of Bifidobacterium bifidum PRL2010 in modulating bacterium-host interactions. Proceedings of the National Academy of Sciences of the United States of America. 2013 Jul 2;110(27):11151-6.

38. Serafini F, Strati F, Ruas-Madiedo P, Turroni F, Foroni E, Duranti S, Milano F, Perotti A, Viappiani A, GUGLIELMETTI S, Buschini A, Margolles A, van Sinderen D, Ventura M. Evaluation of adhesion properties and antibacterial activities of the infant gut commensal Bifidobacterium bifidum PRL20Anaerobe. 2013 Jun;21:9-17.

37. Elli M, Arioli S, GUGLIELMETTI S, Mora D. Biocide susceptibility in bifidobacteria of human origin. Journal of Global Antimicrobial Resistance. 2013 Jun;1(2): 97-101.

36. GUGLIELMETTI S, Mayo B, Álvarez-Martín P. Mobilome and genetic modification of bifidobacteria. Beneficial Microbes. 2013 Jun 1;4(2):143-66.

35. Taverniti V, Stuknyte M, Minuzzo M, Arioli S, De Noni I, Scabiosi C, Cordova ZM, Junttila I, Hämäläinen S, Turpeinen H, Mora D, Karp M, Pesu M, *GUGLIELMETTI S. S-layer protein mediates the stimulatory effect of Lactobacillus helveticus MIMLh5 on innate immunity. Applied and Environmental Microbiology. 2013 Feb;79(4):1221-31.

34. Taverniti V, *GUGLIELMETTI S. Health-Promoting Properties of Lactobacillus helveticus. Frontiers in Microbiology. 2012 Nov 19;3:392.

33. Arioli S, Zambelli D, GUGLIELMETTI S, De Noni I, Pedersen MB, Pedersen PD, Dal Bello F, Mora D. Increasing the heme-dependent respiratory efficiency of Lactococcus lactis by inhibition of lactate dehydrogenase. Applied and Environmental Microbiology. 2013;79(1):376-

32. Virolainen N, GUGLIELMETTI S, Arioli S, Karp M. Bioluminescence-based identification of nisin producers – a rapid and simple screening method for nisinogenic bacteria in food samples. International Journal of Food Microbiology. 2012;158(2):126-

31. Gardana C, Barbieri A, Simonetti P, *GUGLIELMETTI S. Biotransformation strategy to reduce allergens in propolis. Applied and Environmental Microbiology. 2012;78(13):4654-8.

30. Serafini F, Turroni F, GUGLIELMETTI S, Gioiosa L, Foroni E, Sanghez V, Bartolomucci A, Motherway MO, Palanza P, van Sinderen D, Ventura M. An efficient and reproducible method for transformation of genetically recalcitrant bifidobacteria. FEMS Microbiology Letters. 2012;333(2):146-52.

29. Taverniti V, Minuzzo M, Arioli S, Junttila I, Hämäläinen S, Turpeinen H, Mora D, Karp M, Pesu M, *GUGLIELMETTI S. In Vitro Functional and Immunomodulatory Properties of the Lactobacillus helveticus MIMLh5-Streptococcus salivarius ST3 Association That Are Relevant to the Development of a Pharyngeal Probiotic Product. Applied and Environmental Microbiology. 2012;78(12):4209-16.

28. *GUGLIELMETTI S, Mora D, Gschwender M, Popp K. Randomised clinical trial: Bifidobacterium bifidum MIMBb75 significantly alleviates irritable bowel syndrome and improves quality of life–a double-blind, placebo-controlled study. Alimentary Pharmacology & Therapeutics. 2011;33(10):1123-32.

27. Taverniti V, *GUGLIELMETTI S. The immunomodulatory properties of probiotic microorganisms beyond their viability (ghost probiotics: proposal of paraprobiotic concept). Genes & Nutrition. 2011;6(3):261-74.

26. Stuknyte M, De Noni I, GUGLIELMETTI S, Minuzzo M and Mora D. Potential immunomodulatory activity of bovine casein hydrolysates produced after digestion with proteinases of lactic acid bacteria. International Dairy Journal. 2011;21(10):763-9.

25. Vendrame S, GUGLIELMETTI S, Riso P, Arioli S, Klimis-Zacas D, Porrini M. Six-Week Consumption of a wild blueberry powder drink increases bifidobacteria in the human gut. Journal of Agricultural and Food Chemistry. 2011 Dec 28;59(24):12815-20.

24. Arioli S, Ragg E, Scaglioni L, Fessas D, Signorelli M, Karp M, Daffonchio D, De Noni I, Mulas L, Oggioni M, GUGLIELMETTI S, Mora D. Alkalizing reactions streamline cellular metabolism in acidogenic microorganisms. PLoS One. 2010 Nov 30;5(11):e15520.

23. *GUGLIELMETTI S, Taverniti V, Minuzzo M, Arioli S, Zanoni I, Stuknyte M, Granucci F, Karp M, Mora D. A dairy bacterium displays in vitro probiotic properties for the pharyngeal mucosa by antagonizing group A streptococci and modulating the immune response. Infection and Immunity. 2010 Nov;78(11):4734-43.

22. *GUGLIELMETTI S, Taverniti V, Minuzzo M, Arioli S, Stuknyte M, Karp M, Mora D. Oral bacteria as potential probiotics for the pharyngeal mucosa. Applied and Environmental Microbiology. 2010 Jun;76(12):3948-58.

21. Romano D, Gandolfi R, GUGLIELMETTI S, Molinari F. (2010). Enzymatic hydrolysis of capsaicins for the production of vanillylamine using ECB deacylase from Actinoplanes utahensis. Food Chemistry. 2011 Feb; 124(3):1096–8.

20. *GUGLIELMETTI S, Tamagnini I, Minuzzo M, Arioli S, Parini C, Comelli E, Mora D. Study of the adhesion of Bifidobacterium bifidum MIMBb75 to human intestinal cell lines. Current Microbiology. 2009 Aug;59(2):167-72.

19. Arioli S, Roncada P, Salzano AM, Deriu F, Corona S, GUGLIELMETTI S, Bonizzi L, Scaloni A, Mora D. The relevance of carbon dioxide metabolism in Streptococcus thermophilus. Microbiology. 2009 Jun;155(Pt 6):1953-65.

18. Arioli S, Monnet C, GUGLIELMETTI S, Mora D. Carbamoylphosphate synthetase activity is essential for the optimal growth of Streptococcus thermophilus in milk. Journal of Applied Microbiology. 2009 Jul;107(1):348-54.

17. *GUGLIELMETTI S, Tamagnini I, Mora D, Minuzzo M, Scarafoni A, Arioli S, Hellman J, Karp M, Parini C. Implication of an outer surface lipoprotein in adhesion of Bifidobacterium bifidum to Caco-2 cells. Applied and Environmental Microbiology. 2008 Aug;74(15):4695-702.

16. Tamagnini I, GUGLIELMETTI S, Mora D, Parini C, Canzi E, Karp M. Generation and comparison of bioluminescent and fluorescent Bacillus licheniformis. Current Microbiology. 2008 Sep;57(3):245-50.

15. *GUGLIELMETTI S, Ciranna A, Mora D, Parini C, Karp M. Construction, characterization and exemplificative application of bioluminescent Bifidobacterium longum biovar longum. International Journal of Food Microbiology. 2008 Jun 10;124(3):285-90.

14. *GUGLIELMETTI S, De Noni I, Caracciolo F, Molinari F, Parini C, Mora D. Bacterial cinnamoyl esterase activity screening for the production of a novel functional food product. Applied and Environmental Microbiology. 2008 Feb;74(4):1284-8.

13. Stuknyte M, GUGLIELMETTI S, Mora D, Kuisiene N, Parini C, Citavicius D. Complete nucleotide sequence of pGS18, a 62.8-kb plasmid from Geobacillus stearothermophilus strain Extremophiles. 2008 May;12(3):415-29.

12. Stuknyte M, GUGLIELMETTI S, Ricci G, Kuisiene N, Mora D, Parini C, Citavicius D. (2007). Identification and in silico characterization of putative conjugative transfer genes on Geobacillus stearothermophilus plasmids. Annals of Microbiol. 2007;57 (3), pp. 407-14.

11. Arioli S, Monnet C, GUGLIELMETTI S, Parini C, De Noni I, Hogenboom J, Halami PM, Mora D. Aspartate biosynthesis is essential for the growth of Streptococcus thermophilus in milk, and aspartate availability modulates the level of urease activity. Applied and Environmental Microbiology. 2007 Sep;73(18):5789-96.

10. Piagnani MC, GUGLIELMETTI S, Parini C. Identification and effect of two bacterial contaminans on apple organogenesis. Acta Horticulturae. 2007; 738:335-339.

9. *GUGLIELMETTI S, Karp M, Mora D, Tamagnini I, Parini C. Molecular characterization of Bifidobacterium longum biovar longum NAL8 plasmids and construction of a novel replicon screening system. Applied Microbiology and Biotechnology. 2007 Apr;74(5):1053-61.

8. *GUGLIELMETTI S, Mora D, Parini C. Small rolling circle plasmids in Bacillus subtilis and related species: organization, distribution, and their possible role in host physiology. Plasmid. 2007 May;57(3):245-REVIEW

7. GUGLIELMETTI S, Mora D, Manachini PL, Parini C. Genetic relationship among Bacillus licheniformis rolling-circle-replicating plasmids and complete nucleotide sequence of pBL63.1, an atypical replicon. Plasmid. 2005 Sep;54(2):93-103.

6. Canzi E, GUGLIELMETTI S, Mora D, Tamagnini I, Parini C. Conditions affecting cell surface properties of human intestinal bifidobacteria. Antonie Van Leeuwenhoek Journal of Microbiology. 2005 Oct-Nov;88(3-4):207-19.

5. Mora D, Monnet C, Parini C, GUGLIELMETTI S, Mariani A, Pintus P, Molinari F, Daffonchio D, Manachini PL. Urease biogenesis in Streptococcus thermophilus. Research in Microbiology. 2005 Nov;156(9):897-903.

4. Parini C, GUGLIELMETTI S, Mora D, Ricci G. Complete sequence and structural organization of pFL5 and pFL7, two cryptic plasmids from Bacillus licheniformis. Plasmid. 2004 May;51(3):192-202.

3. Parini C, GUGLIELMETTI S, Mora D, Ricci G. Homologies among three Bacillus licheniformis plasmids and molecular characterization of their replication module. Microbiological Research. 2004;159(3):211-7.

2. Fortina MG, Ricci G, Mora D, GUGLIELMETTI S, Manachini PL. Unusual organization for lactose and galactose gene clusters in Lactobacillus helveticus. Applied and Environmental Microbiology. 2003 Jun;69(6):3238-43.

1. Mora D, Ricci G, GUGLIELMETTI S, Daffonchio D, Fortina MG. 16S-23S rRNA intergenic spacer region sequence variation in Streptococcus thermophilus and related dairy streptococci and development of a multiplex ITS-SSCP analysis for their identification. Microbiology. 2003 Mar;149(Pt 3):807-13.

 

International patents

5. Biffi A, Rossi R, Fiore W, GUGLIELMETTI S. (2014). Method to evaluate the effects on the intestinal microbiora of a preparation including microorganisms. Patent Cooperation Treaty Application number: PCT/IB2014/064284.

4. Biffi A, Rossi R, Fiore W, GUGLIELMETTI S. (2014). Use of a preparation including microorganisms to increase the intestinal production of butyric acid, folic acid or niacin, and/or to decrease the intestinal production of succinic acid.  Patent Cooperation Treaty Application number: PCT/IB2014/064285.

3. GUGLIELMETTI S, Mora D. (2011). Bifidobacterium bifidum strains for application in gastrointestinal deseases. European Patent Application 26th April 2011, EP 11000744.0.

2. Ricchiuto GM, Gardana C, GUGLIELMETTI S. (2011). Process for obtaining non-allergic propolis. International Patent Application 22nd September 2011, WO2011/114291.

1. GUGLIELMETTI S, Mora D. (2007). Preparation of polyfunctional fermented food products. University of Milan. European Patent Application 27th April 2007, EP 07008593.1. Patent Cooperation Treaty Application number: PCT/EP2008/003267.

 

 

Book chapters

ALVAREZ MARTIN P, GUGLIELMETTI S, MAYO B. (2010). Mobile genetic elements, cloning vectors and genetic manipulation of bifidobacteria. In: Bifidobacteria: genomics and molecular aspects. Editors: Baltasar Mayo and Douwe van Sinderen. Publisher: Caister Academic Press.

ARIOLI S, GUGLIELMETTI S, CORONA S, MANNINO S, VERSINI G, MORA D. (2007). The urease of Streptococcus thermophilus: a multifunctional enzyme involved in several metabolic pathways and in milk environment adaptation. In: New developments in food microbiology research. ISBN: 978-1-60021-765-4. Editor: M. C. Berger: Nova Science Publiscer, Inc.